Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015901747.1_cds_XP_016451793.1_46102
CDS Infomation

[gene=LOC107776414] [db_xref=GeneID:107776414] [protein=cysteine proteinase RD21a-like] [protein_id=XP_016451793.1] [location=join(8831..9308,10018..10253,10367..10507,10745..11197,11492..11590)] [gbkey=CDS]
Sequence

ATGGCTTTTTTCCGGTCGTTCTTGTTCTTTCTTCTCACCTTCTTTGTTCTTTCATCTGCA
CTTGACATGTCCATCATTAGTTACAACGAACAGCACGGCCAGATGGGAACAACACATCAT
CGTACTGACGATGAAGTCAGAGGATTGTACGAATCGTGGCTTGTTAAGCACGGAAAGAAT
TACAATGCCATTGGAGAGAAGGAGAAACGATTTGAGATTTTTAAGGATAATTTAAGATTC
ATCGACGAGCATAACGCTGAGAACCGCTCATATAAACTTGGGTTGAATCGATTCTCTGAT
CTTACCAACGAGGAATACCGTGCCATGTTCGTGGGTGGACGGTTGGATAGGAAAACGAGG
TTGATGAAGAACCCTAAAAGCGACCGTTACACTTTTCAGGCCGGCGAAAAGTTGCCGGAA
TCCGTTGATTGGAGAGAGAAAGGCGCCGTTGCCCCTGTTAAAGACCAAGGCCAATGCGGG
AGTTGCTGGGCATTCTCAACGGTTGGCGCGGTTGAAGGAATAAATAAAATTGTAACGGGT
GAATTAATTAGCCTGTCAGAGCAAGAGCTTGTTGATTGTGATAGGAGTTATAACCAGGGA
TGTAATGGCGGTCTCATGGATTATGCCTTTGATTTCATCAAAAATAATGGTGGCATTGAC
ACTGGAGATGACTACCCTTACCATGCTCAAGATGGTACTTGTGATCCATACAGGAAAAAT
GCCCGTGTTGTCTCCATTGATGGGTATGAAGATGTTCCAGAAAACGATGAGAAGTCGTTG
ATGAAGGCAGTGGCAAATCAACCGGTTAGTGTTGCTATTGAAGCTGGTGGCAGAGCTTTC
CAGCACTACTCTTCGGGTGTTTTCACTGGATATTGTGGAACACAACTAGACCATGGTGTA
GTTGTAGTTGGCTATGGAACAGAAAATGGCGAAGATTACTGGATTGTGAGGAATTCATGG
GGTCCTAACTGGGGAGAAAGTGGTTACATCAAGCTGCAGCGCAATTTTGCTAATTCTACA
ACTGGAAAGTGTGGAATTGCAATGCAGGCATCTTATCCTCTCAAATCTGGCGCAAATCCT
CCTAATCCTGGCCCATCTCCTCCTACTCCTGTAACACCACCAACTGTTTGCGATGAGTAC
TATAGCTGCCCACAGGGCACTACTTGCTGCTGCATTTATCAATATGGCGAATACTGTTTT
GGCTGGGGATGTTGTCCTTATGAGTCTGCTACCTGCTGTGATGACAACTACAGCTGCTGT
CCTCATGATTATCCTGTCTGTGATGTTGATGCTGGCACTTGCCTTATGAGCAAGGATAAT
CCATTGAAAGTAAAAGCATTGAAGAGAGGTCCAGCTAGAGCAAACTGGTCAGGGATGAAA
TCTAACAGGAAAGTGAGTTACGCTTGA

Peptide Sequence

PEP ID

XP_016451793.1
PEP Infomation

PREDICTED: cysteine proteinase RD21a-like [Nicotiana tabacum]
Sequence

MAFFRSFLFFLLTFFVLSSALDMSIISYNEQHGQMGTTHHRTDDEVRGLYESWLVKHGKN
YNAIGEKEKRFEIFKDNLRFIDEHNAENRSYKLGLNRFSDLTNEEYRAMFVGGRLDRKTR
LMKNPKSDRYTFQAGEKLPESVDWREKGAVAPVKDQGQCGSCWAFSTVGAVEGINKIVTG
ELISLSEQELVDCDRSYNQGCNGGLMDYAFDFIKNNGGIDTGDDYPYHAQDGTCDPYRKN
ARVVSIDGYEDVPENDEKSLMKAVANQPVSVAIEAGGRAFQHYSSGVFTGYCGTQLDHGV
VVVGYGTENGEDYWIVRNSWGPNWGESGYIKLQRNFANSTTGKCGIAMQASYPLKSGANP
PNPGPSPPTPVTPPTVCDEYYSCPQGTTCCCIYQYGEYCFGWGCCPYESATCCDDNYSCC
PHDYPVCDVDAGTCLMSKDNPLKVKALKRGPARANWSGMKSNRKVSYA

Transcript Sequence

Gene sequence data has not been registered.